6K5Q: Crystal structure of lysozyme complexed with a bioactive compound from Jatropha gossypiifolia

PDB ID: 6K5QDownload
MMDB ID: 187924
PDB Deposition Date: 2019/5/30
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 1.177  Å
Source Organism:
Similar Structures:
Biological Unit for 6K5Q: monomeric; determined by author and by software (PISA)
Molecular Components in 6K5Q
Label Count Molecule
Protein (1 molecule)
1
Lysozyme C
(Gene symbol: LYZ)
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
1
ACETATE IONACETATE ION
2
1
GLYCEROLGLYCEROL
3
1
SODIUM IONSODIUM ION
4
1
[(3R,6R)-6-methyloctan-3-yl] 2-[(2S,4S,6R)-2-[(2S)-2-ethylpentyl]-6-methyl-1-(2-oxidanylideneethyl)piperidin-4-yl]ethanesulfonate[(3R,6R)-6-methyloctan-3-yl] 2-[(2S,4S,6R)-2-[(2S)-2-ethylpentyl]-6-methyl-1-(2-oxidanylideneethyl)piperidin-4-yl]ethanesulfonate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303