6JW5: RVD Q* recognizes 5hmC through water-mediated H bonds

PDB ID: 6JW5Download
MMDB ID: 186647
PDB Deposition Date: 2019/4/18
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.99  Å
Source Organism:
Xanthomonas campestris pv. armoraciae▼
Similar Structures:
Molecular Components in 6JW5
Label Count Molecule
Proteins (4 molecules)
4
TAL Effector
Molecule annotation
Nucleotides(8 molecules)
4
DNA (5'-d(*tp*gp*tp*cp*cp*cp*tp*tp*(5hc)p*gp*cp*gp*tp*cp*tp*cp*t)-3')
Molecule annotation
4
DNA (5'-d(*ap*gp*ap*gp*ap*cp*gp*cp*gp*ap*ap*gp*gp*gp*ap*cp*a)-3')
Molecule annotation
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303