6JPN: Crystal structure of the catalytic domain of a multi-domain alginate lyase Dp0100 from thermophilic bacterium Defluviitalea phaphyphila

PDB ID: 6JPNDownload
MMDB ID: 180865
PDB Deposition Date: 2019/3/27
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 2.85  Å
Source Organism:
Similar Structures:
Biological Unit for 6JPN: monomeric; determined by author and by software (PISA)
Molecular Components in 6JPN
Label Count Molecule
Protein (1 molecule)
1
Alginate Lyase
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
5
beta-D-mannopyranuronic acidbeta-D-mannopyranuronic acid
2
1
MANGANESE (II) IONMANGANESE (II) ION
3
2
CALCIUM IONCALCIUM ION
4
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303