6JDV: Crystal structure of Nme1Cas9 in complex with sgRNA and target DNA (ATATGATT PAM) in catalytic state

PDB ID: 6JDVDownload
MMDB ID: 181006
PDB Deposition Date: 2019/2/2
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 3.1  Å
Source Organism:
Neisseria meningitidis 8013▼
Similar Structures:
Biological Unit for 6JDV: tetrameric; determined by author and by software (PISA)
Molecular Components in 6JDV
Label Count Molecule
Protein (1 molecule)
1
Crispr-associated Endonuclease Cas9
Molecule annotation
Nucleotides(3 molecules)
1
Sgrna
Molecule annotation
1
Target DNA Strand
Molecule annotation
1
Non-target DNA Strand
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
MAGNESIUM IONMAGNESIUM ION
2
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303