6JBG: Crystal structure of the bacterial ribosomal decoding site in complex with 4'-deoxy-4'-fluoro neamine analog (equatorial 4'-F)

PDB ID: 6JBGDownload
MMDB ID: 183443
PDB Deposition Date: 2019/1/25
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 3.1  Å
Source Organism:
Biological Unit for 6JBG: dimeric; determined by author and by software (PISA)
Molecular Components in 6JBG
Label Count Molecule
Nucleotides(2 molecules)
2
RNA (5'-r(p*up*gp*cp*gp*up*cp*ap*cp*gp*cp*cp*gp*gp*cp*gp*ap*ap*gp*up*cp*gp*c)-3')
Molecule annotation
Chemical and Non-standard biopolymers (1 molecule)
1
1
(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-glucopyranoside(1R,2R,3S,4R,6S)-4,6-diamino-2,3-dihydroxycyclohexyl 2,6-diamino-2,4,6-trideoxy-4-fluoro-alpha-D-glucopyranoside
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303