6IPF: Post-catalytic Complex of Human DNA Polymerase Mu with Templating Cytosine and Mn-8oxodGMP

PDB ID: 6IPFDownload
MMDB ID: 175815
PDB Deposition Date: 2018/11/3
Updated in MMDB: 2019/06
Experimental Method:
x-ray diffraction
Resolution: 1.77  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 6IPF: tetrameric; determined by author and by software (PISA)
Molecular Components in 6IPF
Label Count Molecule
Protein (1 molecule)
1
DNA-directed Dna/rna Polymerase MU
Molecule annotation
Nucleotides(3 molecules)
1
DNA (5'-d(*cp*gp*gp*cp*cp*tp*ap*cp*g)-3')
Molecule annotation
1
DNA (5'-d(*cp*gp*tp*ap*(8og))-3')
Molecule annotation
1
DNA (5'-d(p*gp*cp*cp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
4
MANGANESE (II) IONMANGANESE (II) ION
2
1
PYROPHOSPHATEPYROPHOSPHATE
3
2
SODIUM IONSODIUM ION
4
1
CHLORIDE IONCHLORIDE ION
5
2
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
6
4
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303