6IKY: K2U complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae

PDB ID: 6IKYDownload
MMDB ID: 180623
PDB Deposition Date: 2018/10/16
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 1.9  Å
Source Organism:
Similar Structures:
Biological Unit for 6IKY: monomeric; determined by author and by software (PISA)
Molecular Components in 6IKY
Label Count Molecule
Protein (1 molecule)
1
Peptide Deformylase
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
3
NICKEL (II) IONNICKEL (II) ION
2
1
(3~{R},4~{R})-4-oxidanyl-3-(phenylmethyl)-4-(phenylmethylsulfanyl)butanoic acid(3~{R},4~{R})-4-oxidanyl-3-(phenylmethyl)-4-(phenylmethylsulfanyl)butanoic acid
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303