6HY1: Plasmodium falciparum spermidine synthase in complex with 5'-methylthioadenosine and N,N'-Bis(3-aminopropyl)-1,4-cyclohexanediamine after catalysis in crystal

PDB ID: 6HY1Download
MMDB ID: 180812
PDB Deposition Date: 2018/10/19
Updated in MMDB: 2019/10
Experimental Method:
x-ray diffraction
Resolution: 1.6  Å
Source Organism:
Similar Structures:
Biological Unit for 6HY1: dimeric; determined by author and by software (PISA)
Molecular Components in 6HY1
Label Count Molecule
Proteins (2 molecules)
2
Spermidine Synthase
(Gene symbol: PF3D7_1129000)
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
2
N,N'-Bis(3-aminopropyl)-1,4-cyclohexanediamineN,N'-Bis(3-aminopropyl)-1,4-cyclohexanediamine
2
2
5'-DEOXY-5'-METHYLTHIOADENOSINE5'-DEOXY-5'-METHYLTHIOADENOSINE
3
1
2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL
4
2
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303