6H8T: Crystal structure of Papain modify by achiral Ru(II)complex

PDB ID: 6H8TDownload
MMDB ID: 241560
PDB Deposition Date: 2018/8/3
Updated in MMDB: 2025/12
Experimental Method:
x-ray diffraction
Resolution: 2.1  Å
Source Organism:
Similar Structures:
Biological Unit for 6H8T: monomeric; determined by author and by software (PISA)
Molecular Components in 6H8T
Label Count Molecule
Protein (1 molecule)
1
Papain
(Gene symbol: LOC110813108)
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
3
ACETATE IONACETATE ION
2
1
CHLORIDE IONCHLORIDE ION
3
1
chloro[N,N-di(pyridin-2-yl-kappaN)pentane-1,5-diamine]rutheniumchloro[N,N-di(pyridin-2-yl-kappaN)pentane-1,5-diamine]ruthenium
4
1
chloro(1-{5-[di(pyridin-2-yl-kappaN)amino]pentyl}pyrrolidine-2,5-dione)rutheniumchloro(1-{5-[di(pyridin-2-yl-kappaN)amino]pentyl}pyrrolidine-2,5-dione)ruthenium
5
1
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303