6FM4: The crystal structure of S. aureus Gyrase complex with ID-130 and DNA

PDB ID: 6FM4Download
MMDB ID: 177231
PDB Deposition Date: 2018/1/30
Updated in MMDB: 2019/09
Experimental Method:
x-ray diffraction
Resolution: 2.7  Å
Source Organism:
Staphylococcus aureus subsp. aureus N315▼
Similar Structures:
Biological Unit for 6FM4: tetrameric; determined by author and by software (PISA)
Molecular Components in 6FM4
Label Count Molecule
Proteins (2 molecules)
2
DNA Gyrase Subunit B,dna Gyrase Subunit B,dna Gyrase Subunit a
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-5ua*d(p*gp*cp*cp*gp*tp*ap*gp*gp*gp*cp*cp*cp*tp*ap*cp*gp*gp*cp*t)-3')
Molecule annotation
1
DNA (5'-5ua*d(p*gp*cp*cp*gp*tp*ap*gp*gp*gp*cp*cp*cp*tp*ap*cp*gp*gp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
3
MANGANESE (II) IONMANGANESE (II) ION
2
2
5'-O-CARBOXY-2'-DEOXYADENOSINE5'-O-CARBOXY-2'-DEOXYADENOSINE
3
1
~{N}-[3-(4-isoquinolin-1-ylpiperazin-1-yl)propyl]benzamide~{N}-[3-(4-isoquinolin-1-ylpiperazin-1-yl)propyl]benzamide
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303