6DIG: Crystal structure of DQA1*01:02/DQB1*06:02 in complex with a hypocretin peptide

PDB ID: 6DIGDownload
MMDB ID: 175101
PDB Deposition Date: 2018/5/23
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 2  Å
Source Organism:
Similar Structures:
Biological Unit for 6DIG: trimeric; determined by author and by software (PISA)
Molecular Components in 6DIG
Label Count Molecule
Proteins (3 molecules)
1
MHC Class II Hla-dq-alpha Chain
(Gene symbol: HLA-DQA1)
Molecule annotation
1
HLA Class II Histocompatibility Antigen, DQ Beta 1 Chain
(Gene symbol: HLA-DQB1)
Molecule annotation
1
13-mer Peptide: Ala-gly-asn-his-ala-ala-gly-ile-leu-thr-leu-gly-lys
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
4
N-ACETYL-D-GLUCOSAMINEN-ACETYL-D-GLUCOSAMINE
2
1
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303