6DIE: Crystal structure of Tdp1 catalytic domain in complex with Zenobia fragment benzene-1,2,4-tricarboxylic acid from single soak

PDB ID: 6DIEDownload
MMDB ID: 175759
PDB Deposition Date: 2018/5/23
Updated in MMDB: 2019/11
Experimental Method:
x-ray diffraction
Resolution: 1.78  Å
Source Organism:
Similar Structures:
Biological Unit for 6DIE: monomeric; determined by author and by software (PISA)
Molecular Components in 6DIE
Label Count Molecule
Protein (1 molecule)
1
Tdp1 Catalytic Domain (Residues 149-609)
(Gene symbol: TDP1)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
benzene-1,2,4-tricarboxylic acidbenzene-1,2,4-tricarboxylic acid
2
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303