6DFG: BG505 MD39 SOSIP trimer in complex with mature BG18 fragment antigen binding

PDB ID: 6DFGDownload
MMDB ID: 180958
PDB Deposition Date: 2018/5/14
Updated in MMDB: 2019/12
Experimental Method:
electron microscopy
Resolution: 4.42  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 6DFG: dodecameric; determined by author
Molecular Components in 6DFG
Label Count Molecule
Proteins (12 molecules)
3
Envelope Glycoprotein Gp160
Molecule annotation
3
Envelope Glycoprotein Gp160
Molecule annotation
3
Mature Bg18 Fragment Antigen Binding Heavy Chain
Molecule annotation
3
Mature Bg18 Fragment Antigen Binding Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (135 molecules)
1
78
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
15
beta-D-mannopyranosebeta-D-mannopyranose
3
42
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303