6DF5: Kaiso (ZBTB33) zinc finger DNA binding domain in complex with the specific Kaiso binding sequence (KBS)

PDB ID: 6DF5Download
MMDB ID: 175542
PDB Deposition Date: 2018/5/14
Updated in MMDB: 2019/06
Experimental Method:
x-ray diffraction
Resolution: 1.819  Å
Source Organism:
Similar Structures:
Biological Unit for 6DF5: trimeric; determined by author and by software (PISA)
Molecular Components in 6DF5
Label Count Molecule
Protein (1 molecule)
1
Transcriptional Regulator Kaiso
(Gene symbol: ZBTB33)
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*tp*gp*cp*tp*tp*cp*cp*tp*gp*cp*cp*ap*ap*tp*ap*ap*cp*g)-3')
Molecule annotation
1
DNA (5'-d(*cp*gp*tp*tp*ap*tp*tp*gp*gp*cp*ap*gp*gp*ap*ap*gp*cp*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
3
ZINC IONZINC ION
2
1
CHLORIDE IONCHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303