5ZWB: Crystal structure of Pyridoxal kinase (PdxK) from Salmonella typhimurium in complex with ADP, PL-linked to Lys233 via a Schiff base

PDB ID: 5ZWBDownload
MMDB ID: 175736
PDB Deposition Date: 2018/5/14
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 5ZWB: dimeric; determined by author and by software (PISA)
Molecular Components in 5ZWB
Label Count Molecule
Proteins (2 molecules)
1
Pyridoxine/pyridoxal/pyridoxamine Kinase
Molecule annotation
1
Pyridoxine/pyridoxal/pyridoxamine Kinase
Molecule annotation
Chemicals and Non-standard biopolymers (21 molecules)
1
3
MAGNESIUM IONMAGNESIUM ION
2
3
SULFATE IONSULFATE ION
3
1
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
4
13
1,2-ETHANEDIOL1,2-ETHANEDIOL
5
1
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303