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5Z00:
AtVAL1 B3 domain in complex with 15bp-DNA
PDB ID:
5Z00
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MMDB ID:
161490
PDB Deposition Date:
2017/12/17
Updated in MMDB:
2018/09
Experimental Method:
x-ray diffraction
Resolution:
2.587 Å
Source Organism:
synthetic construct
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Taxonomy
Molecule
synthetic construct
A, B, E, F, I, J
Arabidopsis thaliana
C, G, K, M
Similar Structures:
VAST+
Download sequence data
Molecular Components in 5Z00
Label
Count
Molecule
Proteins (4 molecules)
C
G
K
M
4
B3 Domain-containing Transcription Repressor Val1
Nucleotides(6 molecules)
A
E
I
3
DNA (5'-d(*ap*ap*tp*tp*cp*tp*gp*cp*ap*tp*gp*gp*ap*tp*t)-3')
B
J
2
DNA (5'-d(*tp*ap*ap*tp*cp*cp*ap*tp*gp*cp*ap*gp*ap*ap*t)-3')
F
1
DNA (5'-d(*tp*ap*ap*tp*cp*cp*ap*tp*gp*cp*ap*gp*ap*ap*tp*t)-3')
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303