5Y9A: Crystal structure of the complex of peptidyl tRNA hydrolase with a phosphate ion at the substrate binding site and cytarabine at a new ligand binding site at 1.1 A resolution

PDB ID: 5Y9ADownload
MMDB ID: 154520
PDB Deposition Date: 2017/8/23
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 1.1  Å
Source Organism:
Similar Structures:
Biological Unit for 5Y9A: monomeric; determined by author and by software (PISA)
Molecular Components in 5Y9A
Label Count Molecule
Protein (1 molecule)
1
Peptidyl-trna Hydrolase
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
CYTARABINECYTARABINE
2
1
PHOSPHATE IONPHOSPHATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303