5XQ2: Crystal structure of T. thermophilus Argonaute protein complexed with a bulge 5A6 on the guide strand

PDB ID: 5XQ2Download
MMDB ID: 155026
PDB Deposition Date: 2017/6/6
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 3.33  Å
Source Organism:
Thermus thermophilus HB27▼
Similar Structures:
Biological Unit for 5XQ2: octameric; determined by author and by software (PISA)
Molecular Components in 5XQ2
Label Count Molecule
Proteins (2 molecules)
2
Ttago (D546n)
Molecule annotation
Nucleotides(6 molecules)
2
DNA (5'-d(p*tp*gp*ap*ap*gp*ap*tp*ap*gp*tp*ap*gp*gp*tp*tp*gp*t)-3')
Molecule annotation
2
DNA (5'-d(*ap*cp*ap*ap*cp*cp*tp*ap*cp*tp*ap*cp*cp*tp*cp*g)-3')
Molecule annotation
2
DNA (5'-d(*ap*gp*t)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303