5XD2: Crystal structure of Mycobacterium smegmatis MutT1 in complex with Ap5A, ATP and manganese

PDB ID: 5XD2Download
MMDB ID: 153524
PDB Deposition Date: 2017/3/24
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 1.75  Å
Source Organism:
Similar Structures:
Biological Unit for 5XD2: monomeric; determined by author and by software (PISA)
Molecular Components in 5XD2
Label Count Molecule
Protein (1 molecule)
1
Nudix Family Protein
(Gene symbol: MSMEG_2390)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
1
ADENOSINE-5'-PENTAPHOSPHATEADENOSINE-5'-PENTAPHOSPHATE
2
1
ADENOSINE-5'-TRIPHOSPHATEADENOSINE-5'-TRIPHOSPHATE
3
1
GLYCEROLGLYCEROL
4
3
MANGANESE (II) IONMANGANESE (II) ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303