5X7R: Crystal structure of Paenibacillus sp. 598K alpha-1,6-glucosyltransferase complexed with isomaltohexaose

PDB ID: 5X7RDownload
MMDB ID: 153090
PDB Deposition Date: 2017/2/27
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 1.95  Å
Source Organism:
Similar Structures:
Biological Unit for 5X7R: dimeric; determined by author
Molecular Components in 5X7R
Label Count Molecule
Proteins (2 molecules)
2
Glycoside Hydrolase Family 31 Alpha-glucosidase
Molecule annotation
Chemicals and Non-standard biopolymers (93 molecules)
1
3
beta-D-glucopyranosebeta-D-glucopyranose
2
18
alpha-D-glucopyranosealpha-D-glucopyranose
3
2
4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose
4
6
CALCIUM IONCALCIUM ION
5
4
NICKEL (II) IONNICKEL (II) ION
6
20
MAGNESIUM IONMAGNESIUM ION
7
16
SULFATE IONSULFATE ION
8
16
2-(N-MORPHOLINO)-ETHANESULFONIC ACID2-(N-MORPHOLINO)-ETHANESULFONIC ACID
9
8
1,2-ETHANEDIOL1,2-ETHANEDIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303