5WO0: DNA polymerase beta substrate complex with incoming 5-FodUTP

PDB ID: 5WO0Download
MMDB ID: 154479
PDB Deposition Date: 2017/8/1
Updated in MMDB: 2017/12
Experimental Method:
x-ray diffraction
Resolution: 1.6  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 5WO0: tetrameric; determined by author and by software (PISA)
Molecular Components in 5WO0
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase Beta
Molecule annotation
Nucleotides(3 molecules)
1
DNA (5'-d(*cp*cp*gp*ap*cp*ap*gp*cp*gp*cp*ap*tp*cp*ap*gp*c)-3')
Molecule annotation
1
DNA (5'-d(*gp*cp*tp*gp*ap*tp*gp*cp*gp*c)-3')
Molecule annotation
1
DNA (5'-d(p*gp*tp*cp*gp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (8 molecules)
1
2
SODIUM IONSODIUM ION
2
2
CALCIUM IONCALCIUM ION
3
3
CHLORIDE IONCHLORIDE ION
4
1
2'-deoxy-5-formyluridine 5'-(tetrahydrogen triphosphate)2'-deoxy-5-formyluridine 5'-(tetrahydrogen triphosphate)
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303