5WD7: Structure of a bacterial polysialyltransferase in complex with fondaparinux

PDB ID: 5WD7Download
MMDB ID: 153265
PDB Deposition Date: 2017/7/4
Updated in MMDB: 2017/08
Experimental Method:
x-ray diffraction
Resolution: 3.1  Å
Source Organism:
Similar Structures:
Biological Unit for 5WD7: dimeric; determined by author and by software (PISA)
Molecular Components in 5WD7
Label Count Molecule
Proteins (2 molecules)
2
Siad
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
1
methyl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranosidemethyl 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranoside
2
1
2-O-sulfo-alpha-L-idopyranuronic acid2-O-sulfo-alpha-L-idopyranuronic acid
3
1
2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose
4
1
beta-D-glucopyranuronic acidbeta-D-glucopyranuronic acid
5
1
2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose
6
2
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303