5VYT: Crystal structure of the WbkC N-formyltransferase (F142A variant) from Brucella melitensis

PDB ID: 5VYTDownload
MMDB ID: 152520
PDB Deposition Date: 2017/5/26
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 5VYT: dimeric; determined by author and by software (PISA)
Molecular Components in 5VYT
Label Count Molecule
Proteins (2 molecules)
2
Gdp-mannose 4,6-dehydratase / Gdp-4-amino-4,6-dideoxy-d-mannose Formyltransferase
(Gene symbol: BME_RS07110)
Molecule annotation
Chemicals and Non-standard biopolymers (4 molecules)
1
2
N-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acidN-{[4-({[(6R)-2-amino-5-formyl-4-oxo-1,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)phenyl]carbonyl}-L-glutamic acid
2
2
GUANOSINE-5'-DIPHOSPHATEGUANOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303