5VYS: Crystal structure of the WbkC N-formyltransferase (C47S variant) from Brucella melitensis

PDB ID: 5VYSDownload
MMDB ID: 152519
PDB Deposition Date: 2017/5/26
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 5VYS: dimeric; determined by author and by software (PISA)
Molecular Components in 5VYS
Label Count Molecule
Proteins (2 molecules)
2
Gdp-mannose 4,6-dehydratase / Gdp-4-amino-4,6-dideoxy-d-mannose Formyltransferase
(Gene symbol: BME_RS07110)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
N-[4-({[(6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acidN-[4-({[(6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridin-6-yl]methyl}amino)benzoyl]-L-glutamic acid
2
1
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
2
GUANOSINE-5'-DIPHOSPHATEGUANOSINE-5'-DIPHOSPHATE
4
1
GUANOSINEGUANOSINE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303