5VFD: Diazabicyclooctenone ETX2514 bound to Class D beta lactamase OXA-24 from A. baumannii

PDB ID: 5VFDDownload
MMDB ID: 151608
PDB Deposition Date: 2017/4/7
Updated in MMDB: 2018/12
Experimental Method:
x-ray diffraction
Resolution: 1.93  Å
Source Organism:
Similar Structures:
Biological Unit for 5VFD: monomeric; determined by author and by software (PISA)
Molecular Components in 5VFD
Label Count Molecule
Protein (1 molecule)
1
Beta-lactamase
(Gene symbol: blaOXA-24)
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
5
SULFATE IONSULFATE ION
2
1
(2S,5R)-1-formyl-4-methyl-5-[(sulfooxy)amino]-1,2,5,6-tetrahydropyridine-2-carboxamide(2S,5R)-1-formyl-4-methyl-5-[(sulfooxy)amino]-1,2,5,6-tetrahydropyridine-2-carboxamide
3
1
(2S,5R)-4-methyl-7-oxo-6-(sulfooxy)-1,6-diazabicyclo[3.2.1]oct-3-ene-2-carboxamide(2S,5R)-4-methyl-7-oxo-6-(sulfooxy)-1,6-diazabicyclo[3.2.1]oct-3-ene-2-carboxamide
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303