5VAJ: BhRNase H - amide-RNA/DNA complex

PDB ID: 5VAJDownload
MMDB ID: 182877
PDB Deposition Date: 2017/3/27
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.95  Å
Source Organism:
Halalkalibacterium halodurans C-125▼
Similar Structures:
Biological Unit for 5VAJ: tetrameric; determined by author and by software (PISA)
Molecular Components in 5VAJ
Label Count Molecule
Proteins (2 molecules)
2
Ribonuclease H
Molecule annotation
Nucleotides(2 molecules)
1
RNA (5'-r(*gp*ap*cp*ap*cp*cp*up*gp*ap*(uru)p*c)-3')
Molecule annotation
1
DNA (5'-d(*gp*ap*ap*tp*cp*ap*gp*gp*tp*gp*tp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (16 molecules)
1
9
GLYCEROLGLYCEROL
2
4
MAGNESIUM IONMAGNESIUM ION
3
3
ACETATE IONACETATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303