5V8M: BG505 SOSIP.664 trimer in complex with broadly neutralizing HIV antibody 3BNC117

PDB ID: 5V8MDownload
MMDB ID: 150529
PDB Deposition Date: 2017/3/22
Updated in MMDB: 2019/12
Experimental Method:
electron microscopy
Resolution: 4.4  Å
Source Organism:
Human immunodeficiency virus 1▼
Similar Structures:
Biological Unit for 5V8M: dodecameric; determined by author
Molecular Components in 5V8M
Label Count Molecule
Proteins (12 molecules)
3
Gp120
Molecule annotation
3
Gp41
Molecule annotation
3
Antibody 3bnc117, Heavy Chain
Molecule annotation
3
Antibody 3bnc117, Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (153 molecules)
1
99
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
15
beta-D-mannopyranosebeta-D-mannopyranose
3
39
alpha-D-mannopyranosealpha-D-mannopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303