5V87: Crystal structure of LARP1-unique domain DM15 bound to m7GpppC

PDB ID: 5V87Download
MMDB ID: 149998
PDB Deposition Date: 2017/3/21
Updated in MMDB: 2017/12
Experimental Method:
x-ray diffraction
Resolution: 1.692  Å
Source Organism:
Similar Structures:
Biological Unit for 5V87: monomeric; determined by author and by software (PISA)
Molecular Components in 5V87
Label Count Molecule
Protein (1 molecule)
1
La-related Protein 1
(Gene symbol: LARP1)
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE
2
1
[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-9-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-9-ium-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [[(2~{R},3~{S},4~{R},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen phosphate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303