5UED: RNA primer-template complex with guanosine dinucleotide ligand G(5')pp(5')G

PDB ID: 5UEDDownload
MMDB ID: 152478
PDB Deposition Date: 2017/1/1
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.5  Å
Source Organism:
Biological Unit for 5UED: dimeric; determined by author and by software (PISA)
Molecular Components in 5UED
Label Count Molecule
Nucleotides(2 molecules)
2
RNA (5'-r(*(lcc)p*(lcc)p*(lcc)p*gp*ap*cp*up*up*ap*ap*gp*up*cp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-6-oxidanylidene-1~{H}-purin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl hydrogen phosphate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303