5U6E: Crystal structure of clade A/E HIV-1 gp120 core in complex with NBD-14010

PDB ID: 5U6EDownload
MMDB ID: 148915
PDB Deposition Date: 2016/12/7
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 2.095  Å
Source Organism:
Similar Structures:
Biological Unit for 5U6E: monomeric; determined by author and by software (PISA)
Molecular Components in 5U6E
Label Count Molecule
Protein (1 molecule)
1
Clade A/E 93th057 Hiv-1 Gp120 Core
Molecule annotation
Chemicals and Non-standard biopolymers (14 molecules)
1
12
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
N-{(1S)-2-amino-1-[5-(hydroxymethyl)-4-methyl-1,3-thiazol-2-yl]ethyl}-5-(4-chloro-3-fluorophenyl)-1H-pyrrole-2-carboxamideN-{(1S)-2-amino-1-[5-(hydroxymethyl)-4-methyl-1,3-thiazol-2-yl]ethyl}-5-(4-chloro-3-fluorophenyl)-1H-pyrrole-2-carboxamide
3
1
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303