5TVR: JMJD2A in complex with Ni(II) and alpha-Ketoglutarate

PDB ID: 5TVRDownload
MMDB ID: 147044
PDB Deposition Date: 2016/11/9
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 2.093  Å
Source Organism:
Similar Structures:
Biological Unit for 5TVR: monomeric; determined by author
Molecular Components in 5TVR
Label Count Molecule
Protein (1 molecule)
1
Lysine-specific Demethylase 4A
(Gene symbol: KDM4A)
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
NICKEL (II) IONNICKEL (II) ION
2
1
2-OXOGLUTARIC ACID2-OXOGLUTARIC ACID
3
1
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303