5TLI: Thermolysin (60% Isopropanol Soaked Crystals)

Citation:
Abstract
Multiple-solvent crystal structure determination (MSCS) allows the position and orientation of bound solvent fragments to be identified by determining the structure of protein crystals soaked in organic solvents. We have extended this technique by the determination of high-resolution crystal structures of thermolysin (TLN), generated from crystals soaked in 2% to 100% isopropanol. The procedure causes only minor changes to the conformation of the protein, and an increasing number of isopropanol interaction sites could be identified as the solvent concentration is increased. Isopropanol occupies all four of the main subsites in the active site, although this was only observed at very high concentrations of isopropanol for three of the four subsites. Analysis of the isopropanol positions shows little correlation with interaction energy computed using a molecular mechanics force field, but the experimentally determined positions of isopropanol are consistent with the structures of known protein-ligand complexes of TLN.
PDB ID: 5TLIDownload
MMDB ID: 13034
PDB Deposition Date: 1998/10/29
Updated in MMDB: 2012/11
Experimental Method:
x-ray diffraction
Resolution: 2.1  Å
Source Organism:
Similar Structures:
Biological Unit for 5TLI: monomeric; determined by author
Molecular Components in 5TLI
Label Count Molecule
Protein (1 molecule)
1
Protein (Thermolysin)
Molecule annotation
Chemicals (8 molecules)
1
1
2
4
3
1
4
2
* Click molecule labels to explore molecular sequence information.

Citing MMDB
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