5TH3: Restriction/modification system-Type II R.SwaI cleaved DNA complex

PDB ID: 5TH3Download
MMDB ID: 145884
PDB Deposition Date: 2016/9/29
Updated in MMDB: 2016/12
Experimental Method:
x-ray diffraction
Resolution: 2.33  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 5TH3: hexameric; determined by software (PISA)
Molecular Components in 5TH3
Label Count Molecule
Proteins (2 molecules)
2
R-swai Protein
Molecule annotation
Nucleotides(4 molecules)
1
DNA (Cleaved 25-mer, Portion 1)
Molecule annotation
1
DNA (Cleaved 25-mer, Portion 2)
Molecule annotation
1
DNA (Cleaved 26-mer, Portion 1)
Molecule annotation
1
DNA (Cleaved 26-mer, Portion 2)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
3
MAGNESIUM IONMAGNESIUM ION
2
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
3
1
ACETATE IONACETATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303