5T05: Crystal structure of heparan sulfate 6-O-sulfotransferase with bound PAP and IdoA2S containing hexasaccharide substrate

PDB ID: 5T05Download
MMDB ID: 147020
PDB Deposition Date: 2016/8/15
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 1.952  Å
Source Organism:
Similar Structures:
Biological Unit for 5T05: monomeric; determined by author and by software (PISA)
Molecular Components in 5T05
Label Count Molecule
Protein (1 molecule)
1
Maltose Binding Protein - Heparan Sulfate 6-o-sulfotransferase Isoform 3 Fusion Protein
(Gene symbol: hs6st3b)
Molecule annotation
Chemicals and Non-standard biopolymers (26 molecules)
1
1
ADENOSINE-3'-5'-DIPHOSPHATEADENOSINE-3'-5'-DIPHOSPHATE
2
2
N-SULFO-ALPHA-D-GLUCOSAMINEN-SULFO-ALPHA-D-GLUCOSAMINE
3
1
BETA-D-GLUCOPYRANURONIC ACIDBETA-D-GLUCOPYRANURONIC ACID
4
1
2-O-sulfo-alpha-L-idopyranuronic acid2-O-sulfo-alpha-L-idopyranuronic acid
5
4
ALPHA-D-GLUCOSEALPHA-D-GLUCOSE
6
9
1,2-ETHANEDIOL1,2-ETHANEDIOL
7
3
CHLORIDE IONCHLORIDE ION
8
3
SODIUM IONSODIUM ION
9
2
L(+)-TARTARIC ACIDL(+)-TARTARIC ACID
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303