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5SZX:
Epstein-Barr virus Zta DNA binding domain homodimer in complex with methylated DNA
PDB ID:
5SZX
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MMDB ID:
182252
PDB Deposition Date:
2016/8/15
Updated in MMDB:
2019/12
Experimental Method:
x-ray diffraction
Resolution:
2.251 Å
Source Organism:
synthetic construct
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Taxonomy
Molecule
synthetic construct
C, D
human gammaherpesvirus 4
A, B
Similar Structures:
VAST+
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Biological Unit for 5SZX: tetrameric; determined by author
Molecular Components in 5SZX
Label
Count
Molecule
Proteins (2 molecules)
A
B
2
ZTA Transcription Factor
Nucleotides(2 molecules)
C
1
DNA (5'-d(*tp*cp*tp*tp*cp*ap*tp*(5cm)p*gp*cp*tp*cp*ap*gp*tp*gp*cp*t)-3')
D
1
DNA (5'-d(*ap*ap*gp*cp*ap*cp*tp*gp*ap*gp*(5cm)p*gp*ap*tp*gp*ap*ap*g)-3')
Chemical and Non-standard biopolymers (1 molecule)
1
1
PHOSPHATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303