5RCA: PanDDA analysis group deposition -- Endothiapepsin changed state model for fragment F2X-Entry Library G08b

PDB ID: 5RCADownload
MMDB ID: 188309
PDB Deposition Date: 2020/3/24
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 1.04  Å
Source Organism:
Similar Structures:
Biological Unit for 5RCA: monomeric; determined by author and by software (PISA)
Molecular Components in 5RCA
Label Count Molecule
Protein (1 molecule)
1
Endothiapepsin
Molecule annotation
Chemicals and Non-standard biopolymers (10 molecules)
1
1
N-ethyl-2-{[5-(propan-2-yl)-1,3,4-oxadiazol-2-yl]sulfanyl}acetamideN-ethyl-2-{[5-(propan-2-yl)-1,3,4-oxadiazol-2-yl]sulfanyl}acetamide
2
2
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
3
4
GLYCEROLGLYCEROL
4
1
ACETATE IONACETATE ION
5
1
TETRAETHYLENE GLYCOLTETRAETHYLENE GLYCOL
6
1
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303