5QOY: PanDDA analysis group deposition -- Crystal Structure of DCP2 (NUDT20) in complex with YW-FY-378

PDB ID: 5QOYDownload
MMDB ID: 175077
PDB Deposition Date: 2019/2/22
Updated in MMDB: 2019/11
Experimental Method:
x-ray diffraction
Resolution: 1.69  Å
Source Organism:
Similar Structures:
Biological Unit for 5QOY: monomeric; determined by author and by software (PISA)
Molecular Components in 5QOY
Label Count Molecule
Protein (1 molecule)
1
Dcp2 (Nudt20)
(Gene symbol: DCP2)
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
2
1,2-ETHANEDIOL1,2-ETHANEDIOL
2
1
DIMETHYL SULFOXIDEDIMETHYL SULFOXIDE
3
2
ACETATE IONACETATE ION
4
1
1-[4-(2H-1,3-benzodioxole-5-carbonyl)-2,3,4,5-tetrahydro-1H-1,4-diazepin-1-yl]ethan-1-one1-[4-(2H-1,3-benzodioxole-5-carbonyl)-2,3,4,5-tetrahydro-1H-1,4-diazepin-1-yl]ethan-1-one
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303