5NMI: Cytochrome bc1 bound to the inhibitor MJM170

PDB ID: 5NMIDownload
MMDB ID: 151739
PDB Deposition Date: 2017/4/5
Updated in MMDB: 2018/12
Experimental Method:
x-ray diffraction
Resolution: 3.5  Å
Source Organism:
Similar Structures:
Biological Unit for 5NMI: 22-meric; determined by software (PISA)
Molecular Components in 5NMI
Label Count Molecule
Proteins (22 molecules)
2
Cytochrome B-c1 Complex Subunit 1, Mitochondrial
(Gene symbol: UQCRC1)
Molecule annotation
2
Cytochrome B-c1 Complex Subunit 2, Mitochondrial
(Gene symbol: UQCRC2)
Molecule annotation
2
Cytochrome B
(Gene symbol: CYTB)
Molecule annotation
2
Cytochrome C1, Heme Protein, Mitochondrial
(Gene symbol: CYC1)
Molecule annotation
4
Cytochrome B-c1 Complex Subunit Rieske, Mitochondrial
(Gene symbol: UQCRFS1)
Molecule annotation
2
Cytochrome B-c1 Complex Subunit 7
(Gene symbol: UQCRB)
Molecule annotation
2
Cytochrome B-c1 Complex Subunit 8
(Gene symbol: UQCRQ)
Molecule annotation
2
Cytochrome B-c1 Complex Subunit 6, Mitochondrial
(Gene symbol: UQCRH)
Molecule annotation
2
Cytochrome B-c1 Complex Subunit 9
(Gene symbol: UQCR10)
Molecule annotation
2
Arg-asn-trp-val-pro-thr-ala-gln-leu-trp-gly-ala-val-gly-ala-val-gly-leu-val-ser-ala-thr
Molecule annotation
Chemicals and Non-standard biopolymers (21 molecules)
1
4
PROTOPORPHYRIN IX CONTAINING FEPROTOPORPHYRIN IX CONTAINING FE
2
2
(4aS)-2-methyl-3-(4-phenoxyphenyl)-5,6,7,8-tetrahydroquinolin-4(4aH)-one(4aS)-2-methyl-3-(4-phenoxyphenyl)-5,6,7,8-tetrahydroquinolin-4(4aH)-one
3
6
1,2-dioleoyl-sn-glycero-3-phosphoethanolamine1,2-dioleoyl-sn-glycero-3-phosphoethanolamine
4
6
CARDIOLIPINCARDIOLIPIN
5
2
HEME CHEME C
6
1
FE2/S2 (INORGANIC) CLUSTERFE2/S2 (INORGANIC) CLUSTER
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303