5N2D: Structure of PD-L1/small-molecule inhibitor complex

PDB ID: 5N2DDownload
MMDB ID: 152167
PDB Deposition Date: 2017/2/7
Updated in MMDB: 2024/10
Experimental Method:
x-ray diffraction
Resolution: 2.35  Å
Source Organism:
Similar Structures:
Biological Unit for 5N2D: tetrameric; determined by software (PISA)
Molecular Components in 5N2D
Label Count Molecule
Proteins (4 molecules)
4
Programmed Cell Death 1 Ligand 1
(Gene symbol: CD274)
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
~{N}-[2-[[2,6-dimethoxy-4-[(2-methyl-3-phenyl-phenyl)methoxy]phenyl]methylamino]ethyl]ethanamide~{N}-[2-[[2,6-dimethoxy-4-[(2-methyl-3-phenyl-phenyl)methoxy]phenyl]methylamino]ethyl]ethanamide
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303