5N09: Crystal structure of L107C/A313C covalently linked dengue 2 virus envelope glycoprotein dimer in complex with the Fab fragment of the broadly neutralizing human antibody EDE2 A11

PDB ID: 5N09Download
MMDB ID: 151515
PDB Deposition Date: 2017/2/2
Updated in MMDB: 2021/10
Experimental Method:
x-ray diffraction
Resolution: 3.9  Å
Source Organism:
dengue virus type 2▼
Similar Structures:
Biological Unit for 5N09: hexameric; determined by author and by software (PISA)
Molecular Components in 5N09
Label Count Molecule
Proteins (6 molecules)
2
Envelope Glycoprotein E
Molecule annotation
2
Broadly Neutralizing Human Antibody Ede2 A11 - Heavy Chain
Molecule annotation
2
Broadly Neutralizing Human Antibody Ede2 A11 - Light Chain
Molecule annotation
Chemicals and Non-standard biopolymers (13 molecules)
1
5
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranosebeta-D-mannopyranose
3
4
alpha-D-mannopyranosealpha-D-mannopyranose
4
2
alpha-L-fucopyranosealpha-L-fucopyranose
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303