5M4L: Crystal Structure of Wild-Type Human Prolidase with Mg ions and LeuPro ligand

PDB ID: 5M4LDownload
MMDB ID: 152615
PDB Deposition Date: 2016/10/18
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 1.49  Å
Source Organism:
Similar Structures:
Biological Unit for 5M4L: dimeric; determined by author and by software (PISA)
Molecular Components in 5M4L
Label Count Molecule
Proteins (2 molecules)
2
Xaa-pro Dipeptidase
(Gene symbol: PEPD)
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
4
MAGNESIUM IONMAGNESIUM ION
2
2
HYDROXIDE IONHYDROXIDE ION
3
2
LEUCINELEUCINE
4
2
PROLINEPROLINE
5
7
GLYCEROLGLYCEROL
6
1
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303