5M1E: Crystal structure of N-terminally tagged UbiD from E. coli reconstituted with prFMN cofactor

PDB ID: 5M1EDownload
MMDB ID: 146274
PDB Deposition Date: 2016/10/7
Updated in MMDB: 2017/04
Experimental Method:
x-ray diffraction
Resolution: 2.62  Å
Source Organism:
Similar Structures:
Biological Unit for 5M1E: hexameric; determined by author and by software (PISA)
Molecular Components in 5M1E
Label Count Molecule
Proteins (6 molecules)
6
3-octaprenyl-4-hydroxybenzoate Carboxy-lyase
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
6
MANGANESE (II) IONMANGANESE (II) ION
2
6
(16~{R})-11,12,14,14-tetramethyl-3,5-bis(oxidanylidene)-8-[(2~{S},3~{S},4~{R})-2,3,4-tris(oxidanyl)-5-phosphonooxy-pentyl]-1,4,6,8-tetrazatetracyclo[7.7.1.0^{2,7}.0^{13,17}]heptadeca-2(7),9(17),10,12-tetraene-16-sulfonic acid(16~{R})-11,12,14,14-tetramethyl-3,5-bis(oxidanylidene)-8-[(2~{S},3~{S},4~{R})-2,3,4-tris(oxidanyl)-5-phosphonooxy-pentyl]-1,4,6,8-tetrazatetracyclo[7.7.1.0^{2,7}.0^{13,17}]heptadeca-2(7),9(17),10,12-tetraene-16-sulfonic acid
3
6
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303