5LY2: JMJD2A/ KDM4A COMPLEXED WITH NI(II), NOG AND Macrocyclic PEPTIDE Inhibitor CP2_R6Kme3 (13-mer)

PDB ID: 5LY2Download
MMDB ID: 149705
PDB Deposition Date: 2016/9/23
Updated in MMDB: 2022/07
Experimental Method:
x-ray diffraction
Resolution: 2.43  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 5LY2: octameric; determined by author and by software (PISA)
Molecular Components in 5LY2
Label Count Molecule
Proteins (8 molecules)
4
Lysine-specific Demethylase 4A
Molecule annotation
4
Cp2_r6kme3
Molecule annotation
Chemicals and Non-standard biopolymers (22 molecules)
1
4
NICKEL (II) IONNICKEL (II) ION
2
4
ZINC IONZINC ION
3
4
N-OXALYLGLYCINEN-OXALYLGLYCINE
4
5
GLYCEROLGLYCEROL
5
5
CHLORIDE IONCHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303