5LRT: Structure of the Deamidase-Depupylase Dop of the Prokaryotic Ubiquitin-like Modification Pathway in Complex with ADP and Phosphate

PDB ID: 5LRTDownload
MMDB ID: 147001
PDB Deposition Date: 2016/8/19
Updated in MMDB: 2017/03
Experimental Method:
x-ray diffraction
Resolution: 1.85  Å
Source Organism:
Similar Structures:
Biological Unit for 5LRT: monomeric; determined by author and by software (PISA)
Molecular Components in 5LRT
Label Count Molecule
Protein (1 molecule)
1
Depupylase
Molecule annotation
Chemicals and Non-standard biopolymers (11 molecules)
1
1
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
2
4
MAGNESIUM IONMAGNESIUM ION
3
1
PHOSPHATE IONPHOSPHATE ION
4
1
HEXAETHYLENE GLYCOLHEXAETHYLENE GLYCOL
5
2
TRIETHYLENE GLYCOLTRIETHYLENE GLYCOL
6
1
DI(HYDROXYETHYL)ETHERDI(HYDROXYETHYL)ETHER
7
1
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303