5LNW: Crystal structure of Arabidopsis thaliana Pdx1-I320-G3P complex

PDB ID: 5LNWDownload
MMDB ID: 146574
PDB Deposition Date: 2016/8/6
Updated in MMDB: 2019/10
Experimental Method:
x-ray diffraction
Resolution: 1.9  Å
Source Organism:
Similar Structures:
Biological Unit for 5LNW: dodecameric; determined by author and by software (PISA)
Molecular Components in 5LNW
Label Count Molecule
Proteins (12 molecules)
12
Pyridoxal 5'-phosphate Synthase Subunit Pdx1.3
(Gene symbol: RSR4)
Molecule annotation
Chemicals and Non-standard biopolymers (42 molecules)
1
12
[(2~{R},3~{R})-2,3-bis(oxidanyl)-3-[[(2~{S})-3-oxidanylidenepent-4-en-2-yl]amino]propyl] dihydrogen phosphate[(2~{R},3~{R})-2,3-bis(oxidanyl)-3-[[(2~{S})-3-oxidanylidenepent-4-en-2-yl]amino]propyl] dihydrogen phosphate
2
12
5-O-phosphono-beta-D-ribofuranose5-O-phosphono-beta-D-ribofuranose
3
12
[(2~{R})-2,3,3-tris(oxidanyl)propyl] dihydrogen phosphate[(2~{R})-2,3,3-tris(oxidanyl)propyl] dihydrogen phosphate
4
6
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303