5LNK: Entire ovine respiratory complex I

PDB ID: 5LNKDownload
MMDB ID: 145161
PDB Deposition Date: 2016/8/4
Updated in MMDB: 2019/12
Experimental Method:
electron microscopy
Resolution: 3.9  Å
Source Organism:
Similar Structures:
Biological Unit for 5LNK: 45-meric; determined by author and by software (PISA)
Molecular Components in 5LNK
Label Count Molecule
Proteins (45 molecules)
1
Mitochondrial Complex I, 51 KDA Subunit
Molecule annotation
1
Mitochondrial Complex I, 24 KDA Subunit
Molecule annotation
1
Mitochondrial Complex I, 75 KDA Subunit
Molecule annotation
1
Mitochondrial Complex I, 49 KDA Subunit
Molecule annotation
1
Mitochondrial Complex I, 30 KDA Subunit
Molecule annotation
1
Mitochondrial Complex I, Psst Subunit
Molecule annotation
1
Mitochondrial Complex I, Tyky Subunit
Molecule annotation
1
Mitochondrial Complex I, ND1 Subunit
(Gene symbol: ND1)
Molecule annotation
1
Mitochondrial Complex I, ND2 Subunit
(Gene symbol: ND2)
Molecule annotation
1
Mitochondrial Complex I, ND3 Subunit
(Gene symbol: ND3)
Molecule annotation
1
Mitochondrial Complex I, ND4 Subunit
(Gene symbol: ND4)
Molecule annotation
1
Mitochondrial Complex I, Nd4l Subunit
(Gene symbol: ND4L)
Molecule annotation
1
Mitochondrial Complex I, ND5 Subunit
(Gene symbol: ND5)
Molecule annotation
1
Mitochondrial Complex I, ND6 Subunit
(Gene symbol: ND6)
Molecule annotation
1
Mitochondrial Complex I, 10 KDA Subunit
Molecule annotation
1
Mitochondrial Complex I, 13 KDA Subunit
Molecule annotation
1
Mitochondrial Complex I, 18 KDA Subunit
Molecule annotation
1
Mitochondrial Complex I, 39 KDA Subunit
Molecule annotation
1
Mitochondrial Complex I, B8 Subunit
Molecule annotation
1
Mitochondrial Complex I, B13 Subunit
Molecule annotation
1
Mitochondrial Complex I, B14 Subunit
Molecule annotation
1
Mitochondrial Complex I, B14.5a Subunit
Molecule annotation
1
Mitochondrial Complex I, B17.2 Subunit
Molecule annotation
2
Acyl Carrier Protein
Molecule annotation
1
Mitochondrial Complex I, 42 KDA Subunit
Molecule annotation
1
Mitochondrial Complex I, 15 KDA Subunit
Molecule annotation
1
Mitochondrial Complex I, B9 Subunit
Molecule annotation
1
Mitochondrial Complex I, B12 Subunit
Molecule annotation
1
Mitochondrial Complex I, B14.5b Subunit
Molecule annotation
1
Mitochondrial Complex I, B15 Subunit
Molecule annotation
1
Mitochondrial Complex I, B16.6 Subunit
Molecule annotation
1
Mitochondrial Complex I, B17 Subunit
Molecule annotation
1
Mitochondrial Complex I, B18 Subunit
Molecule annotation
1
Mitochondrial Complex I, B22 Subunit
Molecule annotation
1
Mitochondrial Complex I, Aggg Subunit
Molecule annotation
1
Nadh Dehydrogenase [ubiquinone] 1 Beta Subcomplex Subunit 8, Mitochondrial
Molecule annotation
1
Mitochondrial Complex I, Esss Subunit
Molecule annotation
1
Mitochondrial Complex I, Kfyi Subunit
Molecule annotation
1
Mitochondrial Complex I, Mnll Subunit
Molecule annotation
1
Mitochondrial Complex I, Mwfe Subunit
Molecule annotation
1
Mitochondrial Complex I, Pdsw Subunit
Molecule annotation
1
Mitochondrial Complex I, Pgiv Subunit
Molecule annotation
1
Mitochondrial Complex I, Sgdh Subunit
Molecule annotation
1
Mitochondrial Complex I, B14.7 Subunit
Molecule annotation
Chemicals and Non-standard biopolymers (25 molecules)
1
6
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
2
1
FLAVIN MONONUCLEOTIDEFLAVIN MONONUCLEOTIDE
3
2
FE2/S2 (INORGANIC) CLUSTERFE2/S2 (INORGANIC) CLUSTER
4
4
1,2-Distearoyl-sn-glycerophosphoethanolamine1,2-Distearoyl-sn-glycerophosphoethanolamine
5
4
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE
6
4
CARDIOLIPINCARDIOLIPIN
7
1
ZINC IONZINC ION
8
1
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATENADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
9
1
S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioateS-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioate
10
1
4'-PHOSPHOPANTETHEINE4'-PHOSPHOPANTETHEINE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303