5LIG: G-Quadruplex formed at the 5'-end of NHEIII_1 Element in human c-MYC promoter bound to triangulenium based fluorescence probe DAOTA-M2

PDB ID: 5LIGDownload
MMDB ID: 143155
PDB Deposition Date: 2016/7/14
Updated in MMDB: 2016/10
Experimental Method:
solution nmr
Source Organism:
Biological Unit for 5LIG: monomeric; determined by software (PISA)
Molecular Components in 5LIG
Label Count Molecule
Nucleotide(1 molecule)
1
DNA (5'-d(*tp*ap*gp*gp*gp*ap*gp*gp*gp*tp*ap*gp*gp*gp*ap*gp*gp*gp*t)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
2
8,12-bis(2-morpholinoethyl)-8H-benzo[ij]xantheno[1,9,8-cdef][2,7]naphthyridin-12-iumhexafluorophosphate8,12-bis(2-morpholinoethyl)-8H-benzo[ij]xantheno[1,9,8-cdef][2,7]naphthyridin-12-iumhexafluorophosphate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303