5KIJ: Crystal structure of the class I human endoplasmic reticulum 1,2-alpha-mannosidase and Man9GlcNAc2-PA complex

PDB ID: 5KIJDownload
MMDB ID: 150617
PDB Deposition Date: 2016/6/16
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.649  Å
Source Organism:
Similar Structures:
Biological Unit for 5KIJ: monomeric; determined by author and by software (PISA)
Molecular Components in 5KIJ
Label Count Molecule
Protein (1 molecule)
1
Endoplasmic Reticulum Mannosyl-oligosaccharide 1,2-alpha-mannosidase
(Gene symbol: MAN1B1)
Molecule annotation
Chemicals and Non-standard biopolymers (17 molecules)
1
1
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
beta-D-mannopyranosebeta-D-mannopyranose
3
7
alpha-D-mannopyranosealpha-D-mannopyranose
4
1
LANTHANUM (III) IONLANTHANUM (III) ION
5
2
SULFATE IONSULFATE ION
6
4
1,4-BUTANEDIOL1,4-BUTANEDIOL
7
1
3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303