5KH7: Crystal structure of fragment (3-[6-Oxo-3-(3-pyridinyl)-1(6H)-pyridazinyl]propanoic acid) bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain

PDB ID: 5KH7Download
MMDB ID: 141412
PDB Deposition Date: 2016/6/14
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 1.7  Å
Source Organism:
Similar Structures:
Biological Unit for 5KH7: monomeric; determined by author and by software (PISA)
Molecular Components in 5KH7
Label Count Molecule
Protein (1 molecule)
1
Histone Deacetylase 6
(Gene symbol: HDAC6)
Molecule annotation
Chemicals and Non-standard biopolymers (19 molecules)
1
3
ZINC IONZINC ION
2
1
3-(6-oxidanylidene-3-pyridin-3-yl-pyridazin-1-yl)propanoic acid3-(6-oxidanylidene-3-pyridin-3-yl-pyridazin-1-yl)propanoic acid
3
15
Molecule information is not available.
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Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303