5KAG: Crystal structure of a dioxygenase in the Crotonase superfamily in P21

PDB ID: 5KAGDownload
MMDB ID: 151875
PDB Deposition Date: 2016/6/1
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.456  Å
Source Organism:
Similar Structures:
Biological Unit for 5KAG: hexameric; determined by author and by software (PISA)
Molecular Components in 5KAG
Label Count Molecule
Proteins (6 molecules)
6
(3,5-dihydroxyphenyl)acetyl-coa 1,2-dioxygenase
Molecule annotation
Chemicals and Non-standard biopolymers (12 molecules)
1
6
[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-4-({3-[(2-{[(3,5-DIHYDROXYPHENYL)ACETYL]AMINO}ETHYL)AMINO]-3-OXOPROPYL}AMINO)-3-HYDROXY-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE[(2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-4-HYDROXY-3-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL (3R)-4-({3-[(2-{[(3,5-DIHYDROXYPHENYL)ACETYL]AMINO}ETHYL)AMINO]-3-OXOPROPYL}AMINO)-3-HYDROXY-2,2-DIMETHYL-4-OXOBUTYL DIHYDROGEN DIPHOSPHATE
2
6
OXYGEN MOLECULEOXYGEN MOLECULE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303